
Updated Aug 2026
Minnesota Lake Water Quality
6,760 lakes across 85 counties, 2,278 with a recent water-quality reading.
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New water-quality readings for Minnesota lakes as Minnesota PCA publishes them. Unsubscribe anytime.
Where to stay near Minnesota's cleanest lakes
Cabins, resorts, and vacation rentals around Rainy Lake (Cass County, MN) and the other cleanest Minnesota lakes pinned on the map. Live availability and prices.
Top-rated places to stay near Rainy Lake (Cass County, MN)
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Explore Minnesota Lakes
Minnesota reports, fishing & travel
Minnesota's cleanest lakes, ranked on agency measurements
Fish species and the cleanest lakes across Minnesota
Species activity outlook by water temperature and season
Where to stay at Minnesota's top lakes, each with its readings
Cleanest lakes within 50 miles of Minneapolis
Cleanest lakes within 50 miles of St. Paul
Cleanest lakes within 50 miles of Duluth
Cleanest lakes within 50 miles of Rochester
Cleanest lakes within 50 miles of Brainerd
Cleanest lakes within 50 miles of St. Cloud
Reservoirs in Minnesota
View all 205 reservoirs →205 of 6,760 Minnesota lakes (3%) are man-made reservoirs in the USACE National Inventory of Dams. 30 carry a High or Significant hazard rating. The oldest matched dam dates to 1864.
EPA-Impaired Lakes in Minnesota
View all 1,614 impaired lakes →1,614 of 6,760 Minnesota lakes (24%) are officially listed as impaired under Clean Water Act §303(d) in the most recent EPA ATTAINS reporting cycle. 1,276 have an approved Total Maximum Daily Load (TMDL) restoration plan.
Minnesota Fishing & Recreation
Licenses, regulations, records, and where to fish across Minnesota.
Counties
All 85 Minnesota counties, ranked by average lake water quality. Compare them against every county nationwide in the county rankings, browse the full directory of lakes, or pick a different state.
Minnesota Lake Water Quality Dataset (2026)
Every measured Minnesota lake in one spreadsheet — water clarity, phosphorus, chlorophyll-a, trophic state, size, public access, and a link to each lake's page.
Top 25 Cleanest Lakes
25 lakes25 lakes ranked on readings
| # | Lake | County | Clarity | Trophic | Max Depth | Access |
|---|---|---|---|---|---|---|
| 1 | Rainy Lake | Cass | 13.9 ft | Oligotrophic | 29 ft | Carry-in |
| 2 | Crane Lake | Otter Tail | 9 ft | Mesotrophic | 43 ft | ✓ Public |
| 3 | Lobster Lake | Douglas | 13 ft | Mesotrophic | 65 ft | ✓ Public |
| 4 | East Fox Lake | Crow Wing | 16.4 ft | Oligotrophic | 65 ft | ✓ Public |
| 5 | Deep Portage Lake | Cass | 15.4 ft | Oligotrophic | 105 ft | Carry-in |
| 6 | Clearwater Lake | Cook | 29 ft | Oligotrophic | 65 ft | Carry-in |
| 7 | Clearwater Lake | Wright | 9.8 ft | Mesotrophic | 73 ft | ✓ Public |
| 8 | Clearwater Lake | Crow Wing | 13 ft | Mesotrophic | 54 ft | ✓ Public |
| 9 | Clearwater Lake | Clearwater | 10 ft | Mesotrophic | 65 ft | ✓ Public |
| 10 | Lower Hay Lake | Crow Wing | 18.5 ft | Oligotrophic | 100 ft | ✓ Public |
| 11 | Latoka Lake | Douglas | 19 ft | Oligotrophic | 108 ft | ✓ Public |
| 12 | Little Birch Lake | Todd | 13 ft | Mesotrophic | 89 ft | ✓ Public |
| 13 | North Long Lake | Crow Wing | 15.1 ft | Mesotrophic | 97 ft | ✓ Public |
| 14 | Bad Medicine Lake | Becker | 25 ft | Oligotrophic | 84 ft | ✓ Public |
| 15 | Mud Lake | Becker | 12.5 ft | Mesotrophic | 34 ft | ✓ Public |
| 16 | Big Lake | Beltrami | 9.7 ft | Mesotrophic | 35 ft | ✓ Public |
| 17 | Big Lake | Carlton | 10 ft | Mesotrophic | 25 ft | ✓ Public |
| 18 | Big Lake | Sherburne | 13.6 ft | Mesotrophic | 48 ft | ✓ Public |
| 19 | Big Lake | St. Louis | 8.2 ft | Mesotrophic | 22 ft | ✓ Public |
| 20 | Big Sugar Bush Lake | Becker | 16.5 ft | Oligotrophic | 42 ft | ✓ Public |
| 21 | Pelican Lake | Otter Tail | 16.4 ft | Mesotrophic | 55 ft | ✓ Public |
| 22 | Pelican Lake | Crow Wing | 14.3 ft | Oligotrophic | 104 ft | ✓ Public |
| 23 | Fullers Lake | Beltrami | 15 ft | Oligotrophic | No recent samples | Not recorded |
| 24 | Birch Lake | Ramsey | 5.9 ft | Mesotrophic | No recent samples | Carry-in |
| 25 | Birch Lake | Wright | 15 ft | Mesotrophic | 52 ft | ✓ Public |
Minnesota lists 6,760 lakes across 85 counties, 2,278 of them with a recent water-quality reading. Most of that sampling flows through monitoring run by the Minnesota Pollution Control Agency and the Minnesota DNR, which feeds state, federal, and volunteer measurements into the EPA Water Quality Portal. The remainder are here because they are real named lakes, not because anyone has sampled them recently. Much of Minnesota's Secchi-disk work is done by the Citizen Lake Monitoring Network, whose volunteers sample through the open-water season alongside the Minnesota Pollution Control Agency and the Minnesota DNR. Coverage is uneven by county: the northeast, on the Iron Range and along the Boundary Waters, tends to be best monitored, while parts of the southwest still have real data gaps. A large share of the state's measured lakes carry low phosphorus and chlorophyll-a readings, which reflects the depth and natural nutrient poverty of glacial lakes in the region.
By surface area the largest lake here is Rainy Lake, at about 210,200 acres, and 713 of the lakes in this index cover more than 500 acres. Size is worth knowing before you go: a large deep basin buffers nutrient inputs by sheer volume, while a shallow one warms quickly and can turn over its whole water column in a single summer storm. Most measured Minnesota lakes sit in the mesotrophic band: moderate productivity, decent clarity, capable of supporting both warm-water and cool-water fisheries. This is the band where well-managed working lakes tend to land. The county with the lowest nutrient and algae readings on average is Clay. The gap between counties is large enough that a single figure for Minnesota lake water quality hides real local variation.
Lake Match
Which lake suits how you actually use one?
Six questions — swimming, fishing, quiet, cabins, drive time — and a shortlist of lakes that fit, with the water quality behind each one.
Source: EPA National Aquatic Resource Surveys and the EPA Water Quality Portal.
More on lake water quality
A data snapshot of the lakes we track: the clearest and the greenest states, and where the water is improving.
How nutrient and algae readings are read against EPA ecoregion condition classes, what each class means in the water, and why a clean reading is not a clearance.
The clearest lakes in America, ranked by measured Secchi depth in feet from EPA monitoring data — and why the famously clear lakes are missing.