
Updated August 2026
Cleanest Lakes by Water Quality
The top 50 U.S. lakes ranked on measured phosphorus, chlorophyll-a and clarity from EPA and state agency sampling, read against EPA National Lakes Assessment 2022 ecoregion classes. Secchi depth breaks ties among lakes with matching nutrient and algae readings. Lakes with limited sampling are excluded.
Of the 33,763 US lakes listed here, 5,873 carry enough nutrient and algae sampling to rank. The top 50 below draw from 8 states, led by Minnesota with 26 — deep, low-nutrient northern waters like Minnesota's Boundary Waters lakes and Wisconsin's spring-fed Northwoods lakes are over-represented at the top.
The cleanest lake on the index is Sunset Lake in Rutland County, VT — first on measured clarity and nutrients, with 36.1 feet of water clarity and phosphorus of 8.5 µg/L. Below that, the rest of the top 10 span 9.6 feet of Secchi between #1 and #10.
All readings come from EPA National Aquatic Resource Surveys and state monitoring programs (MN PCA, WI DNR). Lakes with fewer than three sampling visits are flagged as "limited data." Nutrient and algae readings describe ecology — they do not replace beach-specific E. coli advisories, which your state health department updates separately.
Top 9 Cleanest Lakes
| Rank | Lake | County | State | Clarity | Max Depth |
|---|---|---|---|---|---|
| 1 | Sunset Lake | Rutland | VT | 36.1 ft | - |
| 2 | Flaming Gorge Reservoir | Daggett | UT | 31.8 ft | - |
| 3 | Caspian Lake | Orleans | VT | 29.5 ft | - |
| 4 | Clearwater Lake | Cook | MN | 29 ft | 65 ft |
| 5 | Shadow Lake | Orleans | VT | 28.9 ft | - |
| 6 | Maidstone Lake | Essex | VT | 28.5 ft | - |
| 7 | Lake Willoughby | Orleans | VT | 28.2 ft | - |
| 8 | Holland Lake | Dakota | MN | 27.9 ft | 55 ft |
| 9 | Kerbs Lake | Otter Tail | MN | 27.7 ft | - |
| 10 | Little Mcdonald Lake | Otter Tail | MN | 26.5 ft | 109 ft |
| 11 | Lake Elligo | Orleans | VT | 26.2 ft | - |
| 12 | Coles Run Reservoir | Augusta | VA | 25.8 ft | - |
| 13 | Forest Lake | Washington | VT | 25.6 ft | - |
| 14 | Bad Medicine Lake | Becker | MN | 25 ft | 84 ft |
| 15 | Serpent Lake | Crow Wing | MN | 25 ft | 65 ft |
| 16 | Big Cormorant Lake | Becker | MN | 24.8 ft | 75 ft |
| 17 | Seymour Lake | Orleans | VT | 24.6 ft | - |
| 18 | Echo Lake | Rutland | VT | 24.3 ft | - |
| 19 | Big Blue Lake | Kalkaska | MI | 24 ft | - |
| 20 | Lake Bomoseen | Rutland | VT | 23.6 ft | - |
| 21 | Big Sand Lake | Hubbard | MN | 23 ft | 135 ft |
| 22 | Stony Lake | Cass | MN | 23 ft | 50 ft |
| 23 | Big Twin Lake | Kalkaska | MI | 23 ft | - |
| 24 | Echo Lake | Orleans | VT | 23 ft | - |
| 25 | Turtle Lake | Becker | MN | 23 ft | 73 ft |
| 26 | Belle Taine Lake | Hubbard | MN | 22.8 ft | 56 ft |
| 27 | Eagle Lake | Otter Tail | MN | 22.6 ft | 46 ft |
| 28 | Whitefish Lake | Flathead | MT | 22 ft | - |
| 29 | West Sylvia Lake | Wright | MN | 22 ft | 97 ft |
| 30 | Berlin Pond | Washington | VT | 21.7 ft | - |
| 31 | Lake Fairlee | Orange | VT | 21.7 ft | - |
| 32 | Long Lake | Cass | MN | 21.5 ft | 115 ft |
| 33 | Lake Mirror | Washington | VT | 21.3 ft | - |
| 34 | Round Lake | Sawyer | WI | 21.1 ft | 74 ft |
| 35 | Bearskin Lake | Cook | MN | 21 ft | 78 ft |
| 36 | Six Lake | Otter Tail | MN | 21 ft | 140 ft |
| 37 | East Sylvia Lake | Wright | MN | 21 ft | 78 ft |
| 38 | Harveys Lake | Caledonia | VT | 21 ft | - |
| 39 | Geneva Lake | Walworth | WI | 21 ft | 135 ft |
| 40 | Swenson Lake | Beltrami | MN | 20.7 ft | 76 ft |
| 41 | Mayhew Lake | Cook | MN | 20.6 ft | 84 ft |
| 42 | Long Lake | Clearwater | MN | 20.5 ft | 80 ft |
| 43 | Ten Mile Lake | Cass | MN | 20.5 ft | 208 ft |
| 44 | Newark Pond | Caledonia | VT | 20.4 ft | - |
| 45 | Beaver Lake | Carroll | AR | 20.3 ft | - |
| 46 | Gilmore Lake | Hubbard | MN | 20.3 ft | 54 ft |
| 47 | Little Sand Lake | Hubbard | MN | 20 ft | 80 ft |
| 48 | Long Lake | Beltrami | MN | 20 ft | 87 ft |
| 49 | Big Fish Lake | Stearns | MN | 20 ft | 70 ft |
| 50 | Ossawinnamakee Lake | Crow Wing | MN | 20 ft | 63 ft |
Where to stay near America's cleanest lakes
Planning a lake trip? Jump to live cabin, resort, and hotel availability on each top-ranked lake's page.
- Sunset Lake · Rutland CountyCabins & hotels near Sunset Lake →
- Flaming Gorge Reservoir · Daggett CountyCabins & hotels near Flaming Gorge Reservoir →
- Caspian Lake · Orleans CountyCabins & hotels near Caspian Lake →
- Clearwater Lake · Cook CountyCabins & hotels near Clearwater Lake →
- Shadow Lake · Orleans CountyCabins & hotels near Shadow Lake →
Top 500 Cleanest Lakes — Water Quality Dataset (2026)
The 500 top lakes across US lakes with nutrient and algae readings in one spreadsheet — water clarity, phosphorus, chlorophyll-a, trophic state, size, public access, and a link to each lake's page.
Frequently Asked Questions
Sunset Lake in Rutland County, VT, ranks first on measured clarity and nutrients. Its water clarity (Secchi depth) reads 36.1 feet, with phosphorus at 8.5 µg/L, from EPA and state agency sampling.
Each lake's nutrient and algae readings — total phosphorus, total nitrogen, chlorophyll-a, and turbidity — are shown beside the EPA National Lakes Assessment 2022 condition class for that lake's own ecoregion, so a reading is compared against the lakes it would naturally resemble. LakeQuality publishes no letter grade. Water clarity (Secchi depth) is measured and shown in feet on every lake page but is not scored: EPA assigns no condition class to Secchi depth, and dark water can come from algae, from natural dissolved colour, or from suspended clay. The readings cover nutrients and algae only. They are blind to mercury, PFAS and bacteria, so they are not a swimming clearance and not a fish-consumption clearance. A lake with limited sampling behind it cannot headline this table.
Not always. Water clarity correlates with low algae and low phosphorus — the same factors that drive harmful algal blooms — but Secchi does not measure E. coli, cyanotoxins, or a posted beach closure. Nutrient and algae readings are not a same-day clearance. Always check current swimming advisories before getting in.
Clean lakes share three traits: low nutrient inputs (especially phosphorus from septic, fertilizer, and farm runoff), good circulation and depth (deeper lakes resist warming and stratification), and protected forested shorelines that filter runoff. The cleanest lakes on this list tend to be deep, far from cropland, and surrounded by undeveloped land.
More on clean water
How nutrient and algae readings are read against EPA ecoregion condition classes, what each class means in the water, and why a clean reading is not a clearance.
The cleanest U.S. lakes under 500 acres, ranked on measured nutrients, algae, and water clarity — with the size cutoff applied to the lake, not the sample.
A practical checklist for picking a lake with good water quality — clarity, phosphorus, algae history, depth, and the data to check before you commit.