
Updated Aug 2026
New York Lake Water Quality
1,613 lakes across 59 counties, 167 with a recent water-quality reading.
Top New York Lakes by Measured Water Quality
The clearest, lowest-nutrient water in New York’s sampling record — clarity and depth at a glance.
Lake Map
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New water-quality readings for New York lakes as NY DEC publishes them. Unsubscribe anytime.
Where to stay near New York's cleanest lakes
Cabins, resorts, and vacation rentals around Seneca Lake Platform and the other cleanest New York lakes pinned on the map. Live availability and prices.
Top-rated places to stay near Seneca Lake Platform
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Explore New York Lakes
New York reports, fishing & travel
New York's cleanest lakes, ranked on agency measurements
Species activity outlook by water temperature and season
Where to stay at New York's top lakes, each with its readings
Cleanest lakes within 50 miles of Syracuse
Cleanest lakes within 50 miles of Rochester
Cleanest lakes within 50 miles of Albany
Reservoirs in New York
View all 59 reservoirs →59 of 1,613 New York lakes (4%) are man-made reservoirs in the USACE National Inventory of Dams. 36 carry a High or Significant hazard rating. The oldest matched dam dates to 1820.
EPA-Impaired Lakes in New York
View all 399 impaired lakes →399 of 1,613 New York lakes (25%) are officially listed as impaired under Clean Water Act §303(d) in the most recent EPA ATTAINS reporting cycle. 224 have an approved Total Maximum Daily Load (TMDL) restoration plan.
New York Fishing & Recreation
Licenses, regulations, records, and where to fish across New York.
Counties
All 59 New York counties, ranked by average lake water quality. Compare them against every county nationwide in the county rankings, browse the full directory of lakes, or pick a different state.
New York Lake Water Quality Dataset (2026)
Every measured New York lake in one spreadsheet — water clarity, phosphorus, chlorophyll-a, trophic state, size, public access, and a link to each lake's page.
Cleanest New York Lakes
22 lakes22 lakes ranked on readings
| # | Lake | County | Clarity | Trophic | Max Depth | Access |
|---|---|---|---|---|---|---|
| 1 | Seneca Lake Platform | Seneca | 11.5 ft | Mesotrophic | No recent samples | ✓ Public |
| 2 | Queneska Island Lake | Essex | 17.4 ft | Mesotrophic | No recent samples | ✓ Public |
| 3 | South Lake | Herkimer | No recent samples | Oligotrophic | No recent samples | Not recorded |
| 4 | West Pond | Herkimer | No recent samples | Mesotrophic | No recent samples | Not recorded |
| 5 | Squash Pond | Herkimer | No recent samples | Oligotrophic | No recent samples | ✓ Public |
| 6 | Willys Lake | Herkimer | No recent samples | Oligotrophic | No recent samples | Not recorded |
| 7 | Windfall Pond | Herkimer | No recent samples | Oligotrophic | No recent samples | Not recorded |
| 8 | Loon Hollows Pond | Herkimer | No recent samples | Oligotrophic | No recent samples | Not recorded |
| 9 | Carry Pond | Hamilton | No recent samples | Mesotrophic | No recent samples | Not recorded |
| 10 | Jockeybush Lake | Hamilton | No recent samples | Mesotrophic | No recent samples | Not recorded |
| 11 | Willis Lake | Hamilton | No recent samples | Oligotrophic | No recent samples | Not recorded |
| 12 | Sochia Pond | Franklin | No recent samples | Oligotrophic | No recent samples | ✓ Public |
| 13 | Sunday Pond | Franklin | No recent samples | Oligotrophic | No recent samples | ✓ Public |
| 14 | Barnes Lake | Lewis | No recent samples | Mesotrophic | No recent samples | Not recorded |
| 15 | Main Section Lake | Clinton | 14.8 ft | Mesotrophic | No recent samples | ✓ Public |
| 16 | Little Clear Pond | Franklin | No recent samples | Mesotrophic | No recent samples | Not recorded |
| 17 | Hope Pond | Franklin | No recent samples | Eutrophic | No recent samples | Not recorded |
| 18 | Grass Pond | Franklin | No recent samples | Mesotrophic | No recent samples | ✓ Public |
| 19 | Little Hope Pond | Franklin | No recent samples | Eutrophic | No recent samples | Not recorded |
| 20 | Irondequoit Bay Lake | Monroe | 7.1 ft | Eutrophic | No recent samples | Not recorded |
| 21 | Southern Section Lake | Washington | 2 ft | Eutrophic | No recent samples | ✓ Public |
| 22 | Little Echo Pond | Franklin | No recent samples | Eutrophic | No recent samples | Not recorded |
New York lists 1,613 lakes across 59 counties, 167 of them with a recent water-quality reading. Most of that sampling flows through monitoring run by the New York Department of Environmental Conservation, which feeds state, federal, and volunteer measurements into the EPA Water Quality Portal. The remainder are here because they are real named lakes, not because anyone has sampled them recently. A large share of the state's measured lakes carry low phosphorus and chlorophyll-a readings, which reflects the depth and natural nutrient poverty of glacial lakes in the region.
By surface area the largest lake here is Oneida Lake, at about 51,324 acres, and 99 of the lakes in this index cover more than 500 acres. Size is worth knowing before you go: a large deep basin buffers nutrient inputs by sheer volume, while a shallow one warms quickly and can turn over its whole water column in a single summer storm. Mesotrophic is the dominant trophic class among the measured lakes, a workable middle ground between the pristine oligotrophic deep lakes and the algal-pressured eutrophic shallow ones. The county with the lowest nutrient and algae readings on average is Seneca. The gap between counties is large enough that a single figure for New York lake water quality hides real local variation.
Lake Match
Which lake suits how you actually use one?
Six questions — swimming, fishing, quiet, cabins, drive time — and a shortlist of lakes that fit, with the water quality behind each one.
Source: EPA National Aquatic Resource Surveys and the EPA Water Quality Portal.
More on lake water quality
A data snapshot of the lakes we track: the clearest and the greenest states, and where the water is improving.
How nutrient and algae readings are read against EPA ecoregion condition classes, what each class means in the water, and why a clean reading is not a clearance.
The clearest lakes in America, ranked by measured Secchi depth in feet from EPA monitoring data — and why the famously clear lakes are missing.