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LakeQuality

Pepin Lake

NR
Not yet rated
3 ft clear · Eutrophic · 12,299 acres
Limited DataEutrophic

Pepin Lake in Pepin County, Minnesota is not rated for water quality — its monitoring record does not meet the evidence bar. Water clarity: 3 ft visibility. Maximum depth: 60 ft. Surface area: 12299.45 acres.

Minnesota DNR surveys at Pepin Lake average 22.73 walleye per unit of sampling effort (CPUE) across 25 surveys. The most recent is a Standard Survey dated June 2, 2023. Length samples in the latest survey that recorded them ran 2–27 inches. DNR survey details →

Clarity
3 ft
Max depth
60 ft
Area
12,299 acres
Public access
Yes
Ice-out
Mar 29
Open water
254 days

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Free interactive depth-contour map of Pepin Lake, reaching a maximum surveyed depth of 50 ft. Toggle Depth contours to overlay the bathymetric survey lines. Contour data from Minnesota DNR.

Why Pepin Lake has no grade

We grade a lake only when the monitoring record supports a letter: at least three phosphorus or chlorophyll-a samples in the last ten years, scored against EPA National Lakes Assessment thresholds for this lake’s ecoregion. For Pepin Lake, the only measurement available is water clarity, which is not a water-quality indicator on its own — EPA's National Lakes Assessment does not grade clarity. Sampling here has recorded water clarity, but not phosphorus and algae (chlorophyll-a).

Not Rated is not an F. It is EPA Integrated Reporting Category 3 — insufficient information. The water here may be excellent or poor; nobody has measured enough of it to say. Everything below that has been measured is still reported on this page.

Sampling is run by MPCA and volunteer programs, and published through the EPA Water Quality Portal. Read the full grading methodology.

Pepin Lake is a 12,299-acre lake in Pepin County, Minnesota with a maximum depth of 60 feet (21-foot average). The lake supports 47 documented fish species including American eel, bigmouth buffalo, and black bullhead. Public access is available with 3 public boat landings.

Source: EPA Water Quality Portal sampling records, Minnesota DNR LakeFinder, last sampled 2025-10-03. Grade methodology: LakeQuality methodology.

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Swimming Safety

Not rated

Limited data

Not rated for swimming — there is not enough monitoring data to judge this lake

Compare the safest swimming lakes near Rochester

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Water quality measurements for Pepin Lake

These readings exist but are not enough for an A–F grade — see why.

Very murky, less than 3 ft of visibility. Trophic State Index: 61.

MetricValueGrade
Water Clarity (Secchi Depth)3 ftNot graded
PhosphorusNo recent samples
Chlorophyll-a (Algae)No recent samples
Trophic State Index (TSI)61Eutrophic

High nutrients, frequent algae, reduced clarity

Where to stay near Pepin Lake

Compare lakeside cabins, hotels, and vacation rentals near Pepin Lake in Pepin County, Minnesota — live availability and prices for your trip. Switch the map to Satellite to see the lake and how close each stay is to the water.

Top-rated places to stay near Pepin Lake

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Planning a trip? Cabins and lodging at Pepin Lake · more Minnesota lake trips

DNR fisheries survey

Minnesota DNR surveys at Pepin Lake average 22.73 walleye per unit of sampling effort (CPUE) across 25 surveys. The most recent is a Standard Survey dated June 2, 2023. Length samples in the latest survey that recorded them ran 2–27 inches.

A DNR fisheries survey reports fish abundance and catch rates, not a water-quality grade. LakeQuality does not assign an A–F grade on Pepin Lake — official chemistry is on file, not a letter. Catch rate is not a swim clearance and is not a weekly bite report.

DNR Fisheries Survey Summary

25 surveys on file from MN DNR Fisheries. Most recent: 2023-06-02 (Standard Survey).

Top Species by Catch Rate

SpeciesAvg catch rate (CPUE)Avg Weight
Freshwater Drum30.960.31 lb
Walleye22.731.52 lb
Smallmouth Bass20.191.01 lb

CPUE = catch per unit effort, averaged across surveys (excludes juvenile shoreline seining). Higher CPUE means more abundant in standardized sampling. This is not a weekly bite report.

Length Distributions

Number of fish caught at each inch class in the most recent survey that recorded lengths. Red dashed line marks an approximate trophy threshold for that species.

Freshwater Drum

3,114 fish · 122 in · 2023-06-02
7303650246810121416182022

Walleye

1,101 fish · 227 in · 2023-06-02
2431220trophy 242468101214161820222426

Smallmouth Bass

495 fish · 120 in · 2023-06-02
2011010trophy 182468101214161820

From the 2023-06-02 survey

Anglers in 2021-2023 experienced "low" summer and fall water levels not seen since the late 1980s. These levels presented challenges to anglers whose experience on Pool 4 only took place during the last decade or so when "high water" has been the norm, but strong populations of multiple gamefish species particularly…

Source: MN DNR LakeFinder Fisheries Lake Survey

DNR Reports & Resources

Minnesota DNR LakeFinder publishes lake survey, fish stocking, water access, and aquatic plant data for Pepin Lake. 2 reports on file.

These links open on the official state DNR websites (Wisconsin DNR survey PDFs · Minnesota DNR LakeFinder).

Lake Details

CharacteristicValue
Maximum Depth60 ft
Average Depth21 ft
Surface Area12,299 acres
Shoreline Length54.9 mi
Littoral Zone66%
Public AccessYes

Recreation & Access

3
Boat Landings
Yes
Public Access
  • Deer IslandPublic
  • Ohuta Municipal ParkPublic
  • Roschen ParkPublic

Named access points in the USGS National Boat Ramps inventory, within about 3 miles. More lakes with boat ramps

Fish Species

Click a species to see every graded lake where it is documented.

Fishing Pepin Lake

Invasive & Introduced Species

Red chips are ecologically harmful invasive species. Gray chips are stocked or introduced fish that aren't a current ecological concern.

Blue Catfish(since 1978)wiper(since 1979)

Source: USGS Nonindigenous Aquatic Species (NAS) Database. Hover a chip to see scientific name, ecological context, status, and first-observed year.

Ice Season

Historical ice data from Minnesota DNR (164 observations).

Typical Ice-Out
Mar 29
Typical Ice-In
Dec 8

Estimated open water season: 254 days

EarliestLatest
Ice-Out2000-02-29 (2000)1843-05-20 (1843)
Ice-In1882-11-02 (1882)1890-12-30 (1890)

Most recent ice-out: 2026-03-29

EPA Impairment Status

Pepin Lake is officially listed as impaired under Clean Water Act §303(d) in the 2024 EPA reporting cycle (IR category 4A).

Causes of impairment

Nutrients (phosphorus, nitrogen)

A Total Maximum Daily Load (TMDL) plan has been approved.

Source: EPA ATTAINS assessment unit MN25-0001-00 · Official waterbody report

Regulated Pollution Sources Nearby

2 EPA-permitted facilities operate within about 5 miles of Pepin Lake under Clean Water Act (NPDES) discharge permits, including 1 classified by the EPA as major discharger.

  • Lake City Wwtp
    Lake City · 2.6 mi away · NPDES MN0020664
    Major
  • Federal-Mogul Powertrain Llc
    Lake City · 2.7 mi away · NPDES MN0001147

Facilities permitted to discharge under the Clean Water Act within ~5 miles; proximity does not by itself mean a facility affects this lake. Source: EPA ECHO (ICIS-NPDES), as of 2026-07.

Graded lakes near Pepin Lake

Pepin Lake has no grade, but these lakes within a short drive do.

Nearby Lakes in Pepin County

Frequently asked questions about Pepin Lake

Where is Pepin Lake?

Pepin Lake is a lake in Pepin County, Minnesota. LakeQuality has not rated this lake (UNRATED) — there is not enough recent sampling to assign a letter.

What is the water quality grade for Pepin Lake?

Pepin Lake in Pepin County, Minnesota is not rated for water quality — its monitoring record does not meet the evidence bar. Water clarity: 3 ft visibility. Maximum depth: 60 ft. Surface area: 12299.45 acres.

Is Pepin Lake safe to swim in?

Not rated for swimming — there is not enough monitoring data to judge this lake. Pepin Lake is not rated for water quality — its monitoring record does not meet the evidence bar. Always check local health department advisories before swimming.

How deep is Pepin Lake?

Pepin Lake has a maximum depth of 60 feet and an average depth of 21 feet. The lake covers 12299.45 acres.

What fish are in Pepin Lake?

Fish species found in Pepin Lake include American eel, bigmouth buffalo, black bullhead, black crappie, bluegill, bowfin (dogfish), burbot, carpsucker, channel catfish, common carp, flathead catfish, freshwater drum, gizzard shad, golden redhorse, goldeye, greater redhorse, green sunfish, highfin carpsucker, hybrid crappie, hybrid sunfish, lake sturgeon, largemouth bass, longnose gar, mooneye, northern hog sucker, northern pike, pumpkinseed, quillback, redhorse, river carpsucker, river redhorse, rock bass, sauger, shorthead redhorse, shortnose gar, shovelnose sturgeon, silver redhorse, smallmouth bass, smallmouth buffalo, spotted sucker, walleye, walleye/sauger, white bass, white crappie, white sucker, yellow bullhead, yellow perch. Pepin Lake is located in Pepin County, Minnesota.

What did the DNR fisheries survey find at Pepin Lake?

Minnesota DNR surveys at Pepin Lake average 22.73 walleye per unit of sampling effort (CPUE) across 25 surveys. The most recent is a Standard Survey dated June 2, 2023. Length samples in the latest survey that recorded them ran 2–27 inches. A DNR fisheries survey reports fish abundance and catch rates, not a water-quality grade. LakeQuality does not assign an A–F grade on Pepin Lake — official chemistry is on file, not a letter. Catch rate is not a swim clearance and is not a weekly bite report.

When does Pepin Lake thaw?

Pepin Lake typically has ice-out around Mar 29. Ice typically forms around Dec 8. The open water season is approximately 254 days.

Are there boat ramps on Pepin Lake?

Pepin Lake has 3 documented boat landings in the USGS National Boat Ramps inventory. Named access points include Deer Island, Ohuta Municipal Park, Roschen Park. Public access is listed as yes.

Where this data comes from

97 measurements from 5 monitoring stations, 2020–2025. Retrieved from the EPA Water Quality Portal on 2026-08-02.

Collected and reported by

  • Minnesota Pollution Control Agency - Ambient Surface WaterMNPCA97 samples · 2020–2025

Analytical methods

  • Field measurement/observation, generic method
Monitoring station identifiers (5)

Grade thresholds from the EPA National Lakes Assessment (EPA 841-R-24-006, Table 6-3), applied by ecoregion. See how grades are calculated and data sources.

Other records on this page

Impairment status from EPA ATTAINS 303(d) database

Regulated discharger data from EPA ECHO (ICIS-NPDES)

Lake details from Minnesota DNR LakeFinder

Named boat-access points from the USGS National Boat Ramps inventory

Ice data from Minnesota DNR Climate