
Updated August 2026
The State of Montana's Lakes 2026
Of 85 lakes in Montana, 50% sit in EPA's favourable condition classes for nutrients and algae and 25% in its poorer ones. Tally Lake is the cleanest; 11 lakes (12.9%) are on an official impaired-waters list.
Data Report
85
Monitored lakes sampled
C
Average readings
50%
low nutrient and algae readings
12.9%
On impaired list
Montana nutrient and algae readings
Cleanest lakes in Montana
Cleanest combined nutrient and algae readings, 2026.
- 1.Tally Lake — Flathead County15.2 ft clarity · 5 µg/L P · 1 µg/L chl-a
- 2.Whitefish Lake — Flathead County22.0 ft clarity · 3 µg/L P · 1 µg/L chl-a
- 3.Swan Lake North End — Lake County3 µg/L P · 1 µg/L chl-a
- 4.Little Bitterroot Lake Center — Flathead County4 µg/L P · 1 µg/L chl-a
- 5.Inez Lake — Missoula County7 µg/L P · 2 µg/L chl-a
- 6.Alva Lake — Missoula County5 µg/L P · 1 µg/L chl-a
- 7.Cooney Reservoir — Carbon County12.5 ft clarity · 20 µg/L P · 3 µg/L chl-a
- 8.East Bay Lake — Lake County3 µg/L P
- 9.Big Arm Bay Lake — Lake County2 µg/L P
- 10.Dickey Lake — Lincoln County11 µg/L P · 2 µg/L chl-a
Highest measured algae
Highest measured chlorophyll-a (algae) concentration.
- 1.Boneau Reservoir — Chouteau County39 µg/L chlorophyll-a
Trending lakes
Improving
- 1.Little Bitterroot Lake Center — Flathead County
- 2.Alva Lake — Missoula County
- 3.Lake Alva Mid-Lake Deep — Missoula County
- 4.Canyon Ferry Lake — Broadwater County
- 5.Jette Lake — Lake County
- 6.Elbow Lake — Powell County
- 7.Lake Koocanusa — Lincoln County
- 8.Rainy Lake Deep — Missoula County
Declining
- 1.Loon Lake — Lake County
- 2.Mary Ronan Lake West — Lake County
- 3.Foys Lake — Flathead County
- 4.Rogers Lake — Flathead County
- 5.Mary Ronan Lake East — Lake County
- 6.Lake Helena Outlet — Lewis and Clark County
- 7.Clark Canyon Reservoir — Beaverhead County
- 8.Dickey Lake — Lincoln County
Impaired waters in Montana
11 lakes appear on the EPA/state 303(d) impaired-waters list (5 formally listed, 2 with a cleanup plan/TMDL).
Algal growth · 4Metals (other than mercury) · 4Mercury · 4PCBs · 3Nutrients (phosphorus, nitrogen) · 3Ammonia · 1Hydrologic alteration · 1Oxygen depletion (low DO) · 1
Explore Montana lakes
Readings combine total phosphorus, total nitrogen, chlorophyll-a, and turbidity from the EPA Water Quality Portal and state agencies. See the full methodology, the national State of America’s Lakes report, or all Montana lakes.
Cite this report: LakeQuality, “The State of Montana's Lakes 2026”.